[2022]

*          Okamura T., Hosoi H., Matsufusa T., Akagi Y., Iwamoto R., Kosako H., Murata S., Mushino T., Murata S. I., Sonoki T.: Tirabrutinib maintenance therapy for a patient with high-dose methotrexate-ineligible primary central nervous system lymphoma. Ann Hematol. 2022.

*          Kimura T., Enomoto K., Kono M., Hiraoka M., Takeda S., Kumashiro N., Hirayama S., Kimura E., Tamagawa S., Ohtani M., Murata S. I., Hotomi M.: A case of concurrent occurrence of carcinoma showing thymus-like differentiation and follicular variant of papillary thyroid cancer in the same thyroid. J Surg Case Rep. 2022: rjab570, 2022.

*          Iwabuchi S., Miyamoto K., Hatai M., Mikasa Y., Katsuda M., Murata S. I., Kondo T., Yamaue H., Hashimoto S.: Immune Cells Profiles in the Different Sites of COVID-19-Affected Lung Lobes in a Single Patient. Front Med (Lausanne). 9: 841170, 2022.

*          Itonaga M., Ashida R., Murata S. I., Yamashita Y., Hatamaru K., Tamura T., Kawaji Y., Kayama Y., Emori T., Kawai M., Yamaue H., Matsuzaki I., Nagai H., Kinoshita Y., Wan K., Shimokawa T., Kitano M.: Kras Gene Analysis Using Liquid-Based Cytology Specimens Predicts Therapeutic Responses and Prognosis in Patients with Pancreatic Cancer. Cancers (Basel). 14: 2022.

*          Hosoi H., Tanigawa I., Kosako H., Okamoto A., Iwamoto R., Koh J., Mori M., Hiroi T., Mushino T., Murata S., Tamura S., Murata S. I., Tomita A., Sonoki T.: Liquid biopsies of plasma and cerebrospinal fluid are useful for detection of intravascular lymphoma with central nervous system symptoms alone. Ann Hematol. 101: 709-711, 2022.　　　

[2021]

*          Yamashita Y., Yoshikawa T., Kawaji Y., Tamura T., Hatamaru K., Itonaga M., Ida Y., Maekita T., Iguchi M., Murata S. I., Kitano M.: Novel endoscopic ultrasonography imaging technique for visualizing microcirculation without contrast enhancement in subepithelial lesions: Prospective study. Dig Endosc. 33: 955-961, 2021.

*          Uemura K., Kanno S., Shimoe T., Kojima F., Murata S., Kusuhara H., Wada Y., Asamura S.: Function-preserving Surgery for Femoral Sarcoma by "In Situ Preparation" Technique with a Free Flap. Plast Reconstr Surg Glob Open. 9: e3398, 2021.

*          Sato H., Sonomura T., Onishi S., Koike M., Tanaka R., Ueda S., Okuhira R., Kamisako A., Koyama T., Shima N., Yamamoto S., Sakai Y., Murata S. I., Ikoma A.: Comparison of Uterine Necrosis After Uterine Artery Embolization with Soluble Gelatin Sponge Particles or Tris-acryl Gelatin Microspheres in Swine. Cardiovasc Intervent Radiol. 44: 1780-1789, 2021.

*          Sakata Y., Inaba Y., Kunimoto K., Kaminaka C., Yamamoto Y., Iwahashi Y., Murata S. I., Asamura S., Jinnin M.: The clinical significance of cytokeratin 20 staining pattern in Merkel cell carcinoma. Drug Discov Ther. 15: 162-165, 2021.

*          Musangile F. Y., Matsuzaki I., Okodo M., Shirasaki A., Mikasa Y., Iwamoto R., Takahashi Y., Kojima F., Murata S. I.: Detection of HPV infection in urothelial carcinoma using RNAscope: Clinicopathological characterization. Cancer Med. 10: 5534-5544, 2021.

*          Murata S. I., Kuroda M., Kawamura N., Warigaya K., Musangile F. Y., Matsuzaki I., Kojima F.: Microtubule-organizing center-mediated structural atypia in low- and high-grade urothelial carcinoma. Virchows Arch. 478: 327-334, 2021.

*          Kojima F., Matsuzaki I., Kuroda N., Mikasa Y., Musangile F. Y., Iwamoto R., Takahashi Y., Matsubara A., Kohjimoto Y., Hara I., Murata S. I.: Clinicopathological and Molecular Characteristics of Macroscopically Yellowish-Colored Chromophobe Renal Cell Carcinoma Compared to Non-Yellowish-Colored Chromophobe Renal Cell Carcinoma. Clin Pathol. 14: 2632010X211064821, 2021.

*          Kojima F., Alaghehbandan R., Kuroda N., Matsuzaki I., Mikasa Y., Musangile F. Y., Iwamoto R., Takahashi Y., Iwahashi Y., Warigaya K., Iba A., Hara I., Murata S. I., Hes O.: Paneth-like cells in renal cell carcinomas and in cysts associated with acquired cystic kidney disease: Clinicopathologic analysis, comparative study and description of precursor lesions. Ann Diagn Pathol. 51: 151707, 2021.

*          Iwahashi N., Ikezaki M., Nishitsuji K., Yamamoto M., Matsuzaki I., Kato N., Takaoka N., Taniguchi M., Murata S. I., Ino K., Ihara Y.: Extracellularly Released Calreticulin Induced by Endoplasmic Reticulum Stress Impairs Syncytialization of Cytotrophoblast Model BeWo Cells. Cells. 10: 2021.

*          Iwahashi N., Ikezaki M., Fujimoto M., Komohara Y., Fujiwara Y., Yamamoto M., Mizoguchi M., Matsubara K., Watanabe Y., Matsuzaki I., Murata S. I., Ihara Y., Ino K., Nishitsuji K.: Lipid Droplet Accumulation Independently Predicts Poor Clinical Prognosis in High-Grade Serous Ovarian Carcinoma. Cancers (Basel). 13: 2021.

*          Iguchi H., Murata S. I., Kawago M., Hirai Y., Kojima F., Nishimura Y.: Unique clinicopathological characteristics of pulmonary squamous cell carcinoma with part-solid nodule. Respirol Case Rep. 9: e00692, 2021.

*          Enomoto K., Hirayama S., Kumashiro N., Jing X., Kimura T., Tamagawa S., Matsuzaki I., Murata S. I., Hotomi M.: Synergistic Effects of Lenvatinib (E7080) and MEK Inhibitors against Anaplastic Thyroid Cancer in Preclinical Models. Cancers (Basel). 13: 2021.

*          Akagi Y., Kato T., Yamashita Y., Hosoi H., Murata S., Yamamoto S., Warigaya K., Nakao T., Murata S., Sonoki T., Tamura S.: Intracranial Hemorrhage in a Patient with TAFRO Syndrome Treated with Cyclosporine A and Rituximab. Medicina (Kaunas). 57: 2021.

[2020]

*          Yamashita Y., Hori Y., Kosako H., Oiwa T., Warigaya K., Mushino T., Murata S., Fujimoto M., Nishikawa A., Murata S. I., Sonoki T., Tamura S.: Brentuximab vedotin for refractory anaplastic lymphoma kinase-negative anaplastic large cell lymphoma in leukemic phase with RUNX3 overexpression. Hematol Rep. 12: 8368, 2020.

*          Ueno K., Kunimoto K., Iwahashi Y., Murata S. I., Yamamoto Y., Jinnin M., Asamura S.: Bilateral Eyebrow Sclerosis: A New Clinical Entity. Plast Reconstr Surg Glob Open. 8: e2883, 2020.

*          Takeshima K., Ariyasu H., Uraki S., Morita S., Furukawa Y., Inaba H., Iwakura H., Doi A., Warigaya K., Murata S. I., Enomoto K., Hotomi M., Akamizu T.: False-positive staining of thyroglobulin distinguished from mixed medullary and follicular thyroid carcinoma by duplex in situ hybridization. Endocr J. 67: 1007-1017, 2020.

*          Takeshima K., Ariyasu H., Uraki S., Kitahara C., Morita S., Inaba H., Iwakura H., Warigaya K., Murata S. I., Yamazaki Y., Sasano H., Akamizu T.: Head and Neck Paraganglioma Atypically Carrying a Succinate Dehydrogenase Subunit B Mutation (L157X). Intern Med. 59: 1167-1171, 2020.

*          Okada K. I., Kawai M., Hirono S., Kojima F., Tanioka K., Terada M., Miyazawa M., Kitahata Y., Iwahashi Y., Ueno M., Hayami S., Murata S. I., Shimokawa T., Yamaue H.: Diffusion-weighted MRI predicts the histologic response for neoadjuvant therapy in patients with pancreatic cancer: a prospective study (DIFFERENT trial). Langenbecks Arch Surg. 405: 23-33, 2020.

*          Nishino M., Matsuzaki I., Musangile F. Y., Takahashi Y., Iwahashi Y., Warigaya K., Kinoshita Y., Kojima F., Murata S. I.: Measurement and visualization of cell membrane surface charge in fixed cultured cells related with cell morphology. PLoS One. 15: e0236373, 2020.

*          Muraoka K., Fujimoto M., Iwahashi Y., Matsuzaki I., Yonei N., Murata S. I., Jinnin M.: Primary cutaneous peripheral T-cell lymphoma, not otherwise specified, associated with lymphomatoid papulosis after a 9-year follow up: A case report. J Dermatol. 47: 641-645, 2020.

*          Morita S., Takeshima K., Ariyasu H., Furukawa Y., Kishimoto S., Tsuji T., Uraki S., Mishima H., Kinoshita A., Takahashi Y., Inaba H., Iwakura H., Furuta H., Nishi M., Doi A., Murata S. I., Yoshiura K. I., Akamizu T.: Expression of unfolded protein response markers in the pheochromocytoma with Waardenburg syndrome: a case report. BMC Endocr Disord. 20: 90, 2020.

*          Kojima F., Gandhi J. S., Matsuzaki I., Iba A., Collier S., Yoshikawa T., Kinoshita Y., Warigaya K., Fujimoto M., Kuroda N., Morii E., Hara I., Murata S. I., Amin M. B.: Comprehensive Clinicopathologic Analyses of Acquired Cystic Disease-associated Renal Cell Carcinoma With Focus on Adverse Prognostic Factors and Metastatic Lesions. Am J Surg Pathol. 44: 1031-1039, 2020.

*          Itonaga M., Kitano M., Kojima F., Hatamaru K., Yamashita Y., Tamura T., Nuta J., Kawaji Y., Shimokawa T., Tanioka K., Murata S. I.: The usefulness of EUS-FNA with contrast-enhanced harmonic imaging of solid pancreatic lesions: A prospective study. J Gastroenterol Hepatol. 35: 2273-2280, 2020.

*          Hama M., Sonomura T., Ikoma A., Koike M., Kamisako A., Tanaka R., Koyama T., Sato H., Tanaka F., Ueda S., Okuhira R., Warigaya K., Murata S., Nakai M.: Balloon-Assisted Embolization of Wide-Neck Aneurysms Using a Mixture of n-Butyl Cyanoacrylate, Lipiodol, and Ethanol in Swine: A Comparison of Four n-Butyl Cyanoacrylate Concentrations. Cardiovasc Intervent Radiol. 43: 1540-1547, 2020.

*          Fujimoto M., Matsuzaki I., Nishitsuji K., Yamamoto Y., Murakami D., Yoshikawa T., Fukui A., Mori Y., Nishino M., Takahashi Y., Iwahashi Y., Warigaya K., Kojima F., Jinnin M., Murata S. I.: Adipophilin expression in cutaneous malignant melanoma is associated with high proliferation and poor clinical prognosis. Lab Invest. 100: 727-737, 2020.

*          Enomoto K., Tamagawa S., Kumashiro N., Warigaya K., Takeda S., Gunduz M., Murata S. I., Hotomi M.: A rare case of the recurrent surgery for cribriform-morular variant of papillary thyroid carcinoma. Int J Surg Case Rep. 66: 385-389, 2020.

[2019]

*          村田晋一: 尿管・膀胱・尿道, 標準病理学（第6版）, 医学書院, 575-584, 2019.

*          Yamashita Y., Nishikawa A., Iwahashi Y., Fujimoto M., Sasaki I., Mishima H., Kinoshita A., Hemmi H., Kanazawa N., Ohshima K., Imadome K. I., Murata S. I., Yoshiura K. I., Kaisho T., Sonoki T., Tamura S.: Identification of a novel CCDC22 mutation in a patient with severe Epstein-Barr virus-associated hemophagocytic lymphohistiocytosis and aggressive natural killer cell leukemia. Int J Hematol. 109: 744-750, 2019.

*          Sato F., Bhawal U. K., Tojyo I., Fujita S., Murata S. I., Muragaki Y.: Differential expression of claudin4, occludin, SOX2 and proliferating cell nuclear antigen between basaloid squamous cell carcinoma and squamous cell carcinoma. Mol Med Rep. 20: 1977-1985, 2019.

*          Kojima F., Kuroda N., Matsuzaki I., Miyai H., Hara I., Murata S. I., Hes O.: Aggressive TFEB-rearranged renal cell carcinoma mimicking chromophobe and clear cell renal cell carcinoma. Pathol Int. 69: 51-53, 2019.

*          Kojima F., Bulimbasic S., Alaghehbandan R., Martinek P., Vanecek T., Michalova K., Pivovarcikova K., Michal M., Hora M., Murata S. I., Sugawara E., Rogala J., Limani R., Hes O.: Clear cell renal cell carcinoma with Paneth-like cells: Clinicopathologic, morphologic, immunohistochemical, ultrastructural, and molecular analysis of 13 cases. Ann Diagn Pathol. 41: 96-101, 2019.

*          Kinoshita Y., Inaba M., Kobayashi T. K., Murata S. I.: Intraoperative liquid-based cytology of rinsed tissue fragments from head and neck lesions. Diagn Cytopathol. 47: 389-393, 2019.

*          Iwahashi N., Ikezaki M., Matsuzaki I., Yamamoto M., Toujima S., Murata S. I., Ihara Y., Ino K.: Calreticulin Regulates Syncytialization Through Control of the Synthesis and Transportation of E-Cadherin in BeWo Cells. Endocrinology. 160: 359-374, 2019.

*          Itonaga M., Murata S. I., Hatamaru K., Tamura T., Nuta J., Kawaji Y., Maekita T., Iguchi M., Kato J., Kojima F., Yamaue H., Kawai M., Okada K. I., Hirono S., Shimokawa T., Tanioka K., Kitano M.: Diagnostic efficacy of smear plus liquid-based cytology for EUS-FNA of solid pancreatic lesions: A propensity-matched study. Medicine (Baltimore). 98: e15575, 2019.

*          Fujimoto M., Yamamoto Y., Takai T., Fujimoto N., Ogawa K., Yoshikawa T., Matsuzaki I., Takahashi Y., Iwahashi Y., Warigaya K., Kojima F., Jinnin M., Murata S. I.: Tumor Budding Is an Objective High-risk Factor Associated With Metastasis and Poor Clinical Prognosis in Cutaneous Squamous Cell Carcinoma Sized <4 cm. Am J Surg Pathol. 43: 975-983, 2019.

*          Fujimoto M., Matsuzaki I., Takahashi Y., Iwahashi Y., Warigaya K., Kojima F., Jinnin M., Murata S. I.: High-Risk Human Papillomavirus E6/E7 mRNA Is Rarely Detected in Nonanogenital Cutaneous Squamous Cell Carcinoma: An RNA In Situ Hybridization-Based Tissue Microarray Study. Am J Dermatopathol. 41: 205-210, 2019.

[2018]

*          Kinoshita Y, Inaba M, Kobayashi TK, Murata SI. Intraoperative liquid-based cytology of rinsed tissue fragments from head and neck lesions. Diagn Cytopathol. 2019 May;47(5):389-393. doi: 10.1002/dc.24114. Epub 2018 Nov 12.

*          Fujimoto M, Inaba Y, Takahashi T, Nakanishi G, Muraosa Y, Yahiro M, Kamei K, Murata SI. Image Gallery: Granulomatous dermatitis due to infection with the chlorophyllic green alga Desmodesmus. Br J Dermatol. 2018 Oct;179(4):e167. doi: 10.1111/bjd.17007.

*          Fujimoto M, Yamashita Y, Haga H, Akasaka T, Iwahashi Y, Warigaya K, Kojima F, Hama Y, Tamura S, Sonoki T, Murata SI. EBV-positive nodal low-grade B-cell lymphoma with BCL3, IgA and IRTA1 expression: Is this a polymorphic lymphoproliferative disorder or an EBV-positive nodal marginal zone lymphoma? Pathol Int. 2018 Sep;68(9):538-540. doi: 10.1111/pin.12687. Epub 2018 Jun 19.

*          Takeshima K, Ariyasu H, Iwakura H, Kawai S, Uraki S, Inaba H, Furuta M, Warigaya K, Murata SI, Akamizu T. Predominant Improvement of Alpha Cell Function after Steroid Therapy in a Patient with Autoimmune Pancreatitis: Case Report. Diabetes Ther. 2018 Jun;9(3):1385-1395. doi: 10.1007/s13300-018-0434-0. Epub 2018 May 3.

*          Kojima F, Ueda Y, Matsuzaki I, Hara I, Murata SI. Loss of SWI/SNF complex expression in undifferentiated renal carcinoma in acquired cystic kidney. Pathol Int. 2018 Apr 19. doi: 10.1111/pin.12671.

*          Fujimoto M, Togashi Y, Matsuzaki I, Baba S, Takeuchi K, Inaba Y, Jinnin M, Murata SI.  A case report of atypical Spitz tumor harboring a novel MLPH-ALK gene fusion with discordant ALK immunohistochemistry results. Hum Pathol. 2018 Oct;80:99-103. doi: 10.1016/j.humpath.2018.02.021. Epub 2018 Apr 4.

*          Iwahashi Y, Fujimoto M, Tanaka M, Kusutani N, Furukawa F, Tsuruta D, Yamamoto Y, Murata SI. 2016 measles outbreak in Japan: A report of two cases with reappraisal of histological features. J Dermatol. 2018 Jul;45(7):e185-e186. doi: 10.1111/1346-8138.14224.

*          Fujimoto M, Matsuzaki I, Nishino M, Iwahashi Y, Warigaya K, Kojima F, Ono K, Murata SI. HER2 is frequently overexpressed in hepatoid adenocarcinoma and gastric carcinoma with enteroblastic differentiation: a comparison of 35 cases to 334 gastric carcinomas of other histological types. J Clin Pathol. 2018 Jul;71(7):600-607. doi: 10.1136/jclinpath-2017-204928. Epub 2018 Jan 5.

[2017]

*          Itonaga M, Murata SI, Hatamaru K, Tamura T, Nuta J, Kawaji Y, Maekita T, Iguchi M, Kato J, Kojima F, Yamaue H, Kawai M, Okada KI, Hirono S, Shimokawa T, Tanioka K, Kitano M. Diagnostic efficacy of smear plus liquid-based cytology for EUS-FNA of solid pancreatic lesions: A propensity-matched study. Medicine (Baltimore). 2019 May;98(19):e15575. doi: 10.1097/MD.0000000000015575.

*          Matsuzaki I, Iguchi H, Mikasa Y, Morishita H, Okuda K, Nakaguchi K, Mori Y, Iwahashi Y, Warigaya K, Fujimoto M, Kojima F, Murata SI. Novel Application of Loop-mediated Isothermal Amplification for Rapid Detection of Gene Translocation. Acta Histochem Cytochem. 2017 Dec 26;50(6):169-176. doi: 10.1267/ahc.17024. Epub 2017 Dec 7.

*          Kojima F, Koike H, Matsuzaki I, Iwahashi Y, Warigaya K, Fujimoto M, Ono K, Urata Y, Kohjimoto Y, Hara I, Murata SI. Macrocystic ductal adenocarcinoma of prostate: A rare gross appearance of prostate cancer. Ann Diagn Pathol. 2017 Apr;27:7-13. doi: 10.1016/j.anndiagpath.2016.12.002. Epub 2016 Dec 29.

*          Tamura T, Yamashita Y, Ueda K, Kawaji Y, Itonaga M, Murata SI, Yamamoto K, Yoshida T, Maeda H, Maekita T, Iguchi M, Tamai H, Ichinose M, Kato J. Rapid On-Site Evaluation by Endosonographers during Endoscopic Ultrasonography-Guided Fine-Needle Aspiration for Diagnosis of Gastrointestinal Stromal Tumors. Clin Endosc. 2017 Jul;50(4):372-378. doi: 10.5946/ce.2016.083. Epub 2017 Jan 20.

*          Fujimoto M, Matsuzaki I, Yamamoto Y, Yoshizawa A, Warigaya K, Iwahashi Y, Kojima F, Furukawa F, Murata SI.  Adipophilin expression in cutaneous malignant melanoma. J Cutan Pathol. 2017 Mar;44(3):228-236. doi: 10.1111/cup.12868. Epub 2016 Dec 22.

[2016]

*　　　Itonaga M, Matsuzaki I, Warigaya K, Tamura T, Shimizu Y, Fujimoto M, Kojima F, Ichinose M, Murata S. Novel Methodology for Rapid Detection of KRAS Mutation Using PNA-LNA Mediated Loop-Mediated Isothermal Amplification. PLoS One. 2016 Mar 21;11(3):e0151654. doi:

*　　　Fujimoto M, Yamamoto Y, Matsuzaki I, Warigaya K, Iwahashi Y, Kojima F, Furukawa F, Murata SI. Tumor budding is an independent risk factor for lymph node metastasis in cutaneous squamous cell carcinoma: a single center retrospective study. J Cutan Pathol. 2016 May 26. doi: 10.1111/cup.12740. [Epub ahead of print] PMID: 27226362

*　　　Fujimoto M, Matsuzaki I, Yamamoto Y, Yoshizawa A, Warigaya K, Iwahashi Y, Kojima F, Furukawa F, Murata SI. Adipophilin expression in cutaneous malignant melanoma. J Cutan Pathol. 2016 Nov 25. doi: 10.1111/cup.12868. [Epub ahead of print] PMID: 27886404

*　　　Hosoi H, Warigaya K, Murata S, Mushino T, Kuriyama K, Nishikawa A, Tamura S, Hatanaka K, Hanaoka N, Muragaki Y, Murata S, Nakakuma H, Sonoki T. Refractory Ascites with Liver Fibrosis Developed in Late Phase Allogeneic Hematopoietic Stem Cell Transplantation: Report of Three Patients. Hematol Rep. 2016 Jun 27;8(2):6482. doi: 10.4081/hr.2016.6482. PMID: 27499838

*　　　Minamino H, Inaba H, Ariyasu H, Furuta H, Nishi M, Yoshimasu T, Nishikawa A, Nakanishi M, Tsuchihashi S, Kojima F, Murata S, Inoue G, Akamizu T. A novel immunopathological association of IgG4-RD and vasculitis with Hashimoto's thyroiditis. Endocrinol Diabetes Metab Case Rep. 2016;2016:160004. doi: 10.1530/EDM-16-0004. Epub 2016 Feb 19.

[2015]

*　　　Murata SI, Warigaya K, Matsuzaki I, Itonaga M, Shimizu Y, Shuto M.: Microtubule-organizing center-mediated nuclear polarity in various normal and neoplastic human tissues. Virchows Arch. 2015.

*　　　Tanaka F, Kawai N, Sato M, Minamiguchi H, Nakai M, Nakata K, Sanda H, Sonomura T, Matuzaki I, Murata S.: Effect of transcatheter arterial embolization with a mixture of n-butyl cyanoacrylate, lipiodol, and ethanol on the vascular wall: macroscopic and microscopic studies. Jpn J Radiol 2015.

*　　　Sanda H, Kawai N, Sato M, Tanaka F, Ikoma A, Nakai M, Minamiguchi H, Sonomura T, Matsuzaki I, Warigaya K, Murata S. Synthesis of 24-h soluble gelatin sponge particles and their effect on liver necrosis following hepatic artery embolization: Results of in vitro and in vivo studies. Hepatol Res. 2016 Apr;46(4):335-42. doi: 10.1111/hepr.12539. Epub 2015 Jul 2.

*　　　小島史好,　村田晋一: 知っていると役立つ泌尿器病理・38 (Inflammatory myofibroblastic tumor). 臨床泌尿器科. 69巻 6号 pp. 419-422, 2015.

[2014]

*　　村田晋一,　清水道生：唾液腺腫瘍にみられる空胞細胞．病理診断を極める60のクルー. 清水道生編, 金芳堂, p76-77, 2014.

*　　清水道生，村田晋一：卵巣様間質．病理診断を極める60のクルー. 清水道生編, 金芳堂, p120-121, 2014.

*　　村田晋一,　清水道生：いわゆる剥離性膀胱炎．病理診断を極める60のクルー. 清水道生編, 金芳堂, p124-125, 2014.

[2013]

*　　　Shuto M, Warigaya K, Watanabe H, Shimizu M, Fukuda T, Murata S.: Correlation analysis of nuclear morphology, cytokeratin and Ki-67 expression of urothelial carcinoma cells. Pathol Int. 63(6):311-7. 2013

*　　　Watanabe S, Naganuma H, Shimizu M, Ota S, Murata S, Nihei N, Matsushima J, Mikami S, Kuroda N, Nagashima Y, Nakatani Y.: Adult nephroblastoma with predominant epithelial component: a differential diagnostic candidate of papillary renal cell carcinoma and metanephric adenoma-report of three cases. Case Rep Pathol. doi: 10.1155/2013/675875. Epub 2013.

*　　　村田晋一, 松崎生笛, 割栢健史.: 病理診断におけるクロマチン構造の意義. 和歌山医学. 64(1) 2-6. 2013

*　　　村田晋一, 松崎生笛, 割栢健史.: 改訂された腎盂・尿管・膀胱癌取扱い規約と細胞診. 日本臨床細胞学会九州連合会雑誌. 44:13-20. 2013.

*　　　望野 唯明, 清水 禎彦, 村田 晋一, 安田 政実, 茅野 秀一, 佐々木 惇, 清水 道生: 肺の末梢領域に発生した扁平上皮腺上皮性混合型乳頭腫2例の細胞像. 日本臨床細胞学会雑誌 52(5)：466-472, 2013.

*　　　政岡 秀彦, 佐々木 惇, 村田 晋一, 安田 政実, 清水 道生: 尿細胞診中に出現した前立腺導管腺癌の1例, 日本臨床細胞学会雑誌 52(3)：273-274, 2013.

[2012]

*          Nakahira M, Saito N, Murata SI, Sugasawa M, Shimamura Y, Morita K, Takajyo F, Omura G, Matsumura S: Quantitative diffusion-weighted magnetic resonance imaging as a powerful adjunct to fine needle aspiration cytology for assessment of thyroid nodules. Am J Otolaryngol 45:25-33. 2012..

*          Shuto M, Seyama A, Gotoh Y, Kamada K, Nakamura M, Warigaya K, Watanabe H, Ueno M, Shimizu M, Fukuda T, Murata S: Significant Correlation between Chromosomal Aberration and Nuclear Morphology in Urothelial Carcinoma. Acta Histochem Cytochem 45:25-33 2012.

*          割栢健史, 村田晋一: 尿路上皮癌の病理学的予後因子. 病理と臨床 30(10) 1061-1066. 2012

*          村田晋一: 病理標本の取扱い方, 都築豊徳, 森永正二郎 (編): 腫瘍病理鑑別診断アトラス　腎盂尿管膀胱癌. 東京, 文光堂, 29-34, 2012.

*          村田晋一: 非浸潤性平坦状尿路上皮腫瘍, 都築豊徳, 森永正二郎 (編): 腫瘍病理鑑別診断アトラス　腎盂尿管膀胱癌. 東京, 文光堂, 36-41, 2012.

*          村田晋一: 病理診断報告書の記載, 都築豊徳, 森永正二郎 (編): 腫瘍病理鑑別診断アトラス　腎盂尿管膀胱癌. 東京, 文光堂, 211-222, 2012.

*　　　上原 慶一郎, 市村 隆也, 金 玲, 新井 栄一, 村田 晋一, 安田 政実, 佐々木 惇, 清水 道生: 色素性類上皮黒色腫(pigmented epithelioid melanocytoma)の1症例, 診断病理 29(2)：105-107, 2012.

*　　　森村 敏哉, 林 信一, 米川 浩伸, 大野 康治, 里見 昭, 森野 正明, 村田 晋一, 佐竹 亮介, 谷水 長丸, 池袋 賢一: Alport-leiomyomatosis症候群の1小児例, 日本小児外科学会雑誌 48(1)：43-49, 2012.

[2011]

*          Kawasaki T, Kondo T, Nakazawa T, Mochizuki K, Yamane T, Murata S, Inoue S, Tsunoda H, Katoh R: Is CD56 a specific and reliable neuroendocrine marker for discriminating between endocrine/neuroendocrine ductal carcinoma in situ and intraductal papilloma of the breast? Pathol Int 61:49-51 2011.

*          Shimamura Y, Abe T, Nakahira M, Yoda T, Murata S, Sugasawa M: Immunohistochemical analysis of oral dysplasia: diagnostic assessment by fascin and podoplanin expression. Acta Histochem Cytochem 44:239-245 2011.

*          Uehara K, Yasuda M, Ichimura T, Yamaguchi H, Nagata K, Kayano H, Sasaki A, Murata S, Shimizu M: Peritoneal keratin granuloma associated with endometrioid adenocarcinoma of the uterine corpus. Diagn Pathol 6:104 2011.

*          村田晋一: 病理診断報告書の記載, in 坂本穆彦, 廣川満良 (編): 腫瘍病理鑑別診断アトラス　甲状腺癌. 東京, 文光堂, pp 243, 2011.

*          瀬山敦, 村田晋一: DNA-FISH 法　〜プローブ作製から染色、応用まで〜: 組織細胞化学２０１１. 東京, 日本組織細胞化学会, p 83-92, 2011.

*          日本泌尿器学会・日本病理学会: 腎盂・尿管・膀胱癌取扱い規約: 第1版. 東京, 金原出版, 2011.

*　　　渡谷 岳行, 西 直子, 小澤 栄人, 水越 和歌, 小山 勇, 村田 晋一, 松尾 有香, 岡田 吉隆: 遺伝子異常との関連が推測される後腹膜類上皮血管筋脂肪腫の1例, 臨床放射線 56(12)：1726-1731, 2011

[2010]

*          Aoki R, Mitsui H, Harada K, Kawamura T, Shibagaki N, Tsukamoto K, Murata S, Shimada S: A case of lymphoepithelioma-like carcinoma of the skin associated with Epstein-Barr virus infection. J Am Acad Dermatol 62:681-684 2010.

*          Mochizuki K, Kondo T, Nakazawa T, Iwashina M, Kawasaki T, Nakamura N, Yamane T, Murata S, Ito K, Kameyama K, Kobayashi M, Katoh R: RET rearrangements and BRAF mutation in undifferentiated thyroid carcinomas having papillary carcinoma components. Histopathology 57:444-450 2010.

*          Murata S, Iseki M, Kinjo M, Matsuzaki O, Moriuchi A, Ohtani H, Sakurai T, Satake T, Tsuzuki T: Molecular and immunohistologic analyses cannot reliably solve diagnostic variation of flat intraepithelial lesions of the urinary bladder. Am J Clin Pathol 134:862-872 2010.

*          Suzuki T, Murata S, Yamaguchi H, Shimizu Y, Shimizu M: Epithelial-myoepithelial carcinoma with myoepithelial anaplasia: report of a case with cytologic findings of a rare variant. Acta Cytol 54:605-610 2010.

*          Yamane T, Mitsumata M, Yamaguchi N, Nakazawa T, Mochizuki K, Kondo T, Kawasaki T, Murata S, Yoshida Y, Katoh R: Laminar high shear stress up-regulates type IV collagen synthesis and down-regulates MMP-2 secretion in endothelium. A quantitative analysis. Cell Tissue Res 340:471-479 2010.

*          村田晋一: 尿細胞診に際して知っておくべき泌尿器疾患の病理形態像, スキルアップサイトロジー. 東京, 武藤, p 27-52, 2010.

*          村田晋一: 外陰部, 清水道生 (編): 婦人科病理診断トレーニング. 東京, ベクトル・コア, 2010.

*          村田晋一: 病理診断アトラス　−臨床医のための病理診断アトラス. “彩の国さいたま”病理診断セミナーからのメッセージ−　第２巻, 村田晋一 (編). 東京, ベクトル・コア, 2010.

*          村田晋一: 各論−アトラスと解説, 安田政実 (編): 病理診断アトラス　−臨床医のための病理診断アトラス. “彩の国さいたま”病理診断セミナーからのメッセージ−　第３巻. 東京, ベクトル・コア, 2010.

*　　　玉石 絢香, 鈴木 元晴, 菊地 真理子, 難波 聡, 岡垣 竜吾, 村田 晋一, 相馬 廣明, 板倉 敦夫, 石原 理: 子宮内胎児死亡に至った全身性エリテマトーデス合併妊娠の2例, 埼玉県医学会雑誌 45(1)：123-127, 2010.

*　　　 佐瀬 智子, 清水 禎彦, 瀬山 敦, 茅野 秀一, 新井 栄一, 廣瀬 隆則, 桜井 孝規, 村田 晋一, 安田 政実, 清水 道生:甲状腺乳頭癌でみられる多核巨細胞についての検討, 日本臨床細胞学会雑誌 49(4)：248-253, 2010.

[2009]

*          Motosugi U, Kato T, Kamakura Y, Saze T, Suzuki T, Yajima S, Shimizu Y, Murata S, Shimizu M, Ichikawa T, Araki T: Radiology contributes to better cytological diagnosis of lung tumors. Lung Cancer 66:80-84 2009.

*          Motosugi U, Murata S, Nagata K, Yasuda M, Shimizu M: Thyroid papillary carcinoma with micropapillary and hobnail growth pattern: a histological variant with intermediate malignancy? Thyroid 19:535-537 2009.

*          Motosugi U, Murata S, Shimizu M, Yasuda M, Sakurai T, Shimizu Y, Ban S, Nagata K, Yamaguchi H, Sannohe S: Extranodular background liver parenchyma of focal nodular hyperplasia: histopathological characteristics. Virchows Arch 454:557-562 2009.

*          Motosugi U, Ogawa I, Yoda T, Abe T, Sugasawa M, Murata S, Yasuda M, Sakurai T, Shimizu Y, Shimizu M: Ghost cell odontogenic carcinoma arising in calcifying odontogenic cyst. Ann Diagn Pathol 13:394-397 2009.

*          Nakazawa K, Murata S, Yuminamochi T, Ishii Y, Ohno S, Nakazawa T, Kondo T, Katoh R: p16(INK4a) expression analysis as an ancillary tool for cytologic diagnosis of urothelial carcinoma. Am J Clin Pathol 132:776-784 2009.

*          Nakazawa T, Murata S, Kondo T, Niu D, Mochizuki K, Kawasaki T, Yamane T, Nakamura N, Katoh R: RET/PTC rearrangements arising from a small population of papillary thyroid carcinoma cells, possible candidate for passenger mutation. Virchows Arch 455:35-41 2009.

*          Niu D, Murata S, Kondo T, Nakazawa T, Kawasaki T, Ma D, Yamane T, Nakamura N, Katoh R: Involvement of centrosomes in nuclear irregularity of thyroid carcinoma cells. Virchows Arch 455:149-157 2009.

*          Ouyang Y, Kamijo A, Murata S, Okamoto A, Endo S, Katoh R, Masuyama K: Expression of cysLT1 and cysLT2 receptor in chronic hyperplastic eosinophilic sinusitis. Acta Histochem Cytochem 42:191-196 2009.

*          Shimizu Y, Jin L, Yamaguchi H, Motosugi U, Sannohe S, Nagata K, Sakurai T, Murata S, Yasuda M, Shimizu M: Detection of lymphatic invasion in resected cases of primary pancreatic cancer based on immunohistochemistry of D2-40. Ann Diagn Pathol 13:168-172 2009.

*          三枝勉, 小山政史, 井原達矢, 村田晋一, 吉村一良, 上野宗久: 異時性孤立性対側副腎転移をきたした腎細胞癌. 臨床泌尿器科 63:625-627 2009.

*          寺部雄太, 吉村一良, 井原達矢, 黒田功, 村田晋一, 上野宗久: 左側腹部痛を主訴とした後腹膜脱分化型脂肪肉腫. 臨床泌尿器科 63:913-917 2009.

*          村田晋一: 下部尿路, 鷹橋浩幸（監訳）. ロビンス＆コトラン 病理学アトラス（訳本）. 東京, エルゼビア・ジャパン, p 267-276, 2009.

*          村田晋一: 各論−アトラスと解説, 清水道生 (編): 病理診断アトラス　−臨床医のための病理診断アトラス. “彩の国さいたま”病理診断セミナーからのメッセージ−　第１巻. 東京, ベクトル・コア, 2009.

*          村田晋一: 発癌および化生におけるRNA転写制御に関わる染色体高次構造の解析. 埼玉医科大学雑誌 36:36-41 2009.

*          村田晋一, 廣瀬隆則: 骨軟部組織病変の細胞診, 清水道生 (編): 実用細胞診トレーニング これでわかる細胞の見方！. 東京, 秀潤社, p 156-160, 2009.

*          村田晋一, 廣川満良: 【甲状腺腫瘍】 甲状腺微小癌update. 病理と臨床 27:448-452 2009.

*          大野四季音, 村田晋一, 弓納持勉, 石井喜雄, 中澤久美子, 岩佐敏, 加藤良平: 尿中に腫瘍細胞が出現した乳頭状腎細胞癌の1例. 日本臨床細胞学会雑誌 48:61-65 2009.

[2008]

*          Inoue S, Inoue M, Kawasaki T, Takahashi H, Inoue A, Maruyama T, Matsuda K, Kunitomo K, Murata S, Fujii H: Six cases showing radial scar/complex sclerosing lesions of the breast detected by breast cancer screening. Breast Cancer 15:247-251 2008.

*          Kawasaki T, Nakamura S, Sakamoto G, Murata S, Tsunoda-Shimizu H, Suzuki K, Takahashi O, Nakazawa T, Kondo T, Katoh R: Neuroendocrine ductal carcinoma in situ (NE-DCIS) of the breast--comparative clinicopathological study of 20 NE-DCIS cases and 274 non-NE-DCIS cases. Histopathology 53:288-298 2008.

*          Nakazawa T, Murata S, Kondo T, Nakamura N, Yamane T, Iwasa S, Katoh R: Histopathology of the thyroid in amiodarone-induced hypothyroidism. Pathol Int 58:55-58 2008.

*          石川めぐみ, 安藤典子, 岩本拓, 原田和俊, 古橋正男, 川村龍吉, 柴垣直孝, 佐藤栄一, 村田晋一, 島田眞路: 神経線維腫症1型に合併した悪性末梢神経鞘腫瘍の姉弟例. 臨床皮膚科 62:487-489 2008.

*          赤池英憲, 板倉淳, 大澤俊也, 藤井秀樹, 中澤匡男, 村田晋一, 加藤良平: Granulocyte-colony stimulating factor(G-CSF)産生膵腺扁平上皮癌の1剖検例. 膵臓 23:494-500 2008.

*          村田晋一: 【尿路系腫瘍をめぐる諸問題】 組織診および細胞診からみた尿路上皮異形成の取り扱い. 病理と臨床 26:152-156 2008.

*          村田晋一, 加藤良平: FISH 法の実際と応用: 組織細胞化学２００８. 東京, 日本組織細胞化学会, p 59-66, 2008.

[2007]

*          Inukai T, Akahane K, Nemoto A, Kuroda I, Noguchi S, Hirose K, Honna H, Goi K, Kondo T, Iwasa S, Murata S, Kato R, Nakazawa S, Sugita K: Revision of the cytological diagnosis of CNS relapse into aseptic meningitis in a patient with TEL-AML1+ acute lymphoblastic leukaemia by FISH analysis of mononuclear cells in cerebrospinal fluid. Histopathology 50:947-949 2007.

*          Kondo T, Hashi A, Murata SI, Fischer SE, Nara M, Nakazawa T, Yuminamochi T, Hoshi K, Katoh R: Gastric mucin is expressed in a subset of endocervical tunnel clusters: type A tunnel clusters of gastric phenotype. Histopathology 50:843-850 2007.

*          Kondo T, Nakazawa T, Murata S, Kurebayashi J, Ezzat S, Asa SL, Katoh R: Enhanced B-Raf protein expression is independent of V600E mutant status in thyroid carcinomas. Hum Pathol 38:1810-1818 2007.

*          Liu YL, Matsuzaki T, Nakazawa T, Murata S, Nakamura N, Kondo T, Iwashina M, Mochizuki K, Yamane T, Takata K, Katoh R: Expression of aquaporin 3 (AQP3) in normal and neoplastic lung tissues. Hum Pathol 38:171-178 2007.

*          Murata S, Nakazawa T, Ohno N, Terada N, Iwashina M, Mochizuki K, Kondo T, Nakamura N, Yamane T, Iwasa S, Ohno S, Katoh R: Conservation and alteration of chromosome territory arrangements in thyroid carcinoma cell nuclei. Thyroid 17:489-496 2007.

*          Nara M, Hashi A, Murata S, Kondo T, Yuminamochi T, Nakazawa K, Katoh R, Hoshi K: Lobular endocervical glandular hyperplasia as a presumed precursor of cervical adenocarcinoma independent of human papillomavirus infection. Gynecol Oncol 106:289-298 2007.

*          欧陽いく暉, 上條篤, 村田晋一, 遠藤周一郎, 加藤良平, 増山敬祐: 好酸球性副鼻腔炎患者におけるシスティニルロイコトリエンレセプターの発現. 耳鼻咽喉科免疫アレルギー 25:150-151 2007.

*          三井広, 柴垣直孝, 金重勝博, 村田晋一, 加藤良平, 島田眞路: 【下腿潰瘍】 臨床例　四肢の紫斑、潰瘍で発症した多発性骨髄腫. 皮膚病診療 29:1157-1160 2007.

[2006]

*          Hashi A, Xu JY, Kondo T, Hashi K, Yuminamochi T, Nara M, Murata S, Katoh R, Hoshi K: p16INK4a overexpression independent of human papillomavirus infection in lobular endocervical glandular hyperplasia. Int J Gynecol Pathol 25:187-194 2006.

*          Takeshita K, Murata S, Mitsufuji S, Wakabayashi N, Kataoka K, Tsuchihashi Y, Okanoue T: Clinicopathological characteristics of esophageal squamous papillomas in Japanese patients--with comparison of findings from Western countries. Acta Histochem Cytochem 39:23-30 2006.

*          Terada N, Ohno N, Murata S, Katoh R, Stallcup WB, Ohno S: Immunohistochemical study of NG2 chondroitin sulfate proteoglycan expression in the small and large intestines. Histochem Cell Biol 126:483-490 2006.

*          村田晋一, 端晶彦, 加藤良平: 【内分泌症候群(第2版)　その他の内分泌疾患を含めて】 腫瘍とホルモン　異所性ホルモン産生腫瘍　異所性甲状腺ホルモン産生腫瘍. 日本臨床別冊:291-294 2006.

*          村田晋一, 端晶彦, 加藤良平: 異所性甲状腺ホルモン産生腫瘍: 内分泌症候群（第2版）. 東京, 日本臨床社, p 291-294, 2006.

*          村田晋一, 望月邦夫, 中沢匡男, 岩科雅範, 近藤哲夫, 中村暢樹, 山根徹, 岩佐敏, 加藤良平: Multicolor DNA FISH 法の実際と応用, 組織細胞化学２００６. 東京, 日本組織細胞化学会, p 63-71, 2006.

*          端晶彦, 弓納持勉, 村田晋一, 近藤哲夫, 奈良政敏, 中澤久美子, 端圭子, 大森真紀子, 加藤良平, 星和彦: 【悪性腺腫】分葉状頸管腺過形成(LEGH)と悪性腺腫の細胞学的・組織学的検討. 日本臨床細胞学会雑誌 45:126-133 2006.

[2005]

*          Kobrinsky E, Mager DE, Bentil SA, Murata S, Abernethy DR, Soldatov NM: Identification of plasma membrane macro- and microdomains from wavelet analysis of FRET microscopy. Biophys J 88:3625-3634 2005.

*          Kondo T, Hashi A, Murata S, Nakazawa T, Yuminamochi T, Nara M, Hoshi K, Katoh R: Endocervical adenocarcinomas associated with lobular endocervical glandular hyperplasia: a report of four cases with histochemical and immunohistochemical analyses. Modern Pathol 18:1199-1210 2005.

*          Kondo T, Kato K, Nakazawa T, Miyata K, Murata S, Katoh R: Mucinous carcinoma (poorly differentiated carcinoma with extensive extracellular mucin deposition) of the thyroid: a case report with immunohistochemical studies. Hum Pathol 36:698-701 2005.

*          Kondo T, Nakazawa T, Murata S, Katoh R: Stromal elastosis in papillary thyroid carcinomas. Hum Pathol 36:474-479 2005.

*          Kondo T, Nakazawa T, Murata SI, Katoh R: Expression of CD73 and its ecto-5'-nucleotidase activity are elevated in papillary thyroid carcinomas. Histopathology 48:612-614 2005.

*          Murata S, Herman P, Iwashina M, Mochizuki K, Nakazawa T, Kondo T, Nakamura N, Lakowicz JR, Katoh R: Application of microscopic Forster resonance energy transfer to cytological diagnosis of the thyroid tumors. J Biomed Opt 10:034008 2005.

*          Nakazawa T, Kondo T, Kobayashi Y, Takamura N, Murata S, Kameyama K, Muramatsu A, Ito K, Kobayashi M, Katoh R: RET gene rearrangements (RET/PTC1 and RET/PTC3) in papillary thyroid carcinomas from an iodine-rich country (Japan). Cancer 104:943-951 2005.

*          Ohno N, Terada N, Murata S, Katoh R, Ohno S: Application of cryotechniques with freeze-substitution for the immunohistochemical demonstration of intranuclear pCREB and chromosome territory. J Histochem Cytochem 53:55-62 2005.

*          Xu JY, Hashi A, Kondo T, Yuminamochi T, Nara M, Hashi K, Murata S, Katoh R, Hoshi K: Absence of human papillomavirus infection in minimal deviation adenocarcinoma and lobular endocervical glandular hyperplasia. Int J Gynecol Pathol 24:296-302 2005.

*          近藤哲夫, 村田晋一, 加藤良平: 【甲状腺・副甲状腺腫瘍の最近の話題】　種々の症候群に伴う甲状腺疾患. 病理と臨床 23:26-32 2005.

*          村田晋一: 甲状腺機能亢進: 甲状腺病理与. 人民工生出版, p 99-108, 2005.

[2004]

*          Akasaki K, Nakamura N, Tsukui N, Yokota S, Murata S, Katoh R, Michihara A, Tsuji H, Marques ET, Jr., August JT: Human dendritic cell lysosome-associated membrane protein expressed in lung type II pneumocytes. Arch Biochem Biophys 425:147-157. 2004.

*          Murata S, Kishikawa T, Isojima Y, Tsuchihashi Y, Katoh R: Unusual cytologic findings in low grade papillary transitional cell carcinoma. Acta Cytol 48:492-496. 2004.

*          Murata S, Miyata K, Takaishi K, Mochizuki K, Nakazawa T, Kondo T, Nakamura N, Katoh R: Mixed papillary adenocarcinoma and transitional cell carcinoma of the uterine cervix. Pathol Int 54:63-66. 2004.

*          Ohno N, Terada N, Murata S, Yamakawa H, Newsham IF, Katoh R, Ohara O, Ohno S: Immunolocalization of protein 4.1B/DAL-1 during neoplastic transformation of mouse and human intestinal epithelium. Histochem Cell Biol 122:579-586 2004.

*          加藤良平, 近藤哲夫, 村田晋一: 【異所性ホルモン産生腫瘍　疾患概念,診断及び治療に関する最新情報】　甲状腺の腫瘍性病変におけるホルモン産生・分泌. 日本臨床 62:929-933 2004.

*          梶田芳弘, 山本徹, 中路啓介, 牧和夫, 八谷孝, 村田晋一, 加藤良平, 越智幸男: 【内分泌 興味ある症例】　甲状腺　甲状腺機能性結節,亜急性甲状腺炎を合併した橋本病の1女性例. ホルモンと臨床 52:80-85 2004.

*          村田晋一, 岩科雅範, 望月邦夫, 中澤匡男, 近藤哲夫, 中村暢樹, 加藤良平: Microscopic fluorescence resonance energy transfer: 組織細胞化学２００４.東京, 学際企画, p 119-125, 2004.

[2003]

*          Hashi A, Yuminamochi T, Murata S, Iwamoto H, Honda T, Hoshi K: Wilms tumor gene immunoreactivity in primary serous carcinomas of the fallopian tube, ovary, endometrium, and peritoneum. Int J Gynecol Pathol 22:374-377. 2003.

*          Kondo T, Nakamura N, Suzuki K, Murata S, Muramatsu A, Kawaoi A, Katoh R: Expression of human pendrin in diseased thyroids. J Histochem Cytochem 51:167-173. 2003.

*          Murata S, Herman P, Mochizuki K, Nakazawa T, Kondo T, Nakamura N, Lakowicz J, Katoh R: Spatial Distribution Analysis of AT- and GC-Rich Regions in Nuclei Using Corrected Fluorescence Resonance Energy Transfer. J Histochem Cytochem 51:951-958 2003.

*          Murata S, Mochizuki K, Nakazawa T, Kondo T, Nakamura N, Yamashita H, Urata Y, Ashihara T, Katoh R: Morphological abstraction of thyroid tumor cell nuclei using morphometry with factor analysis. Microscopy Research and Technique 61:457-462 2003.

*          Wang Y, Wang PY, Qin LQ, Davaasambuu G, Kaneko T, Xu J, Murata S, Katoh R, Sato A: The development of diabetes mellitus in Wistar rats kept on a high-fat/low-carbohydrate diet for long periods. Endocrine 22:85-92. 2003.

*          加藤良平, 村田晋一: 【内分泌外科の最近の進歩】　内分泌臓器,特に甲状腺における病理学的知見. 内分泌外科 20:162-166 2003.

*          望月邦夫, 村田晋一, 中澤匡男, 中村暢樹, 加藤良平: 【内分泌病理学最近の進歩　2003】　消化管カルチノイドにおける粘液と粘液関連蛋白(MUC-1,MUC-2)の発現に関する病理学的検討. ホルモンと臨床 51:183-188 2003.

[2002]

*          Murata S, Mochizuki K, Nakazawa T, Kondo T, Nakamura N, Yamashita H, Urata Y, Ashihara T, Katoh R: Detection of underlying characteristics of nuclear chromatin patterns of thyroid tumor cells using texture and factor analyses. Cytometry (Part A) 49:91-95. 2002.

*          Nakamura N, Miyagi E, Murata S, Kawaoi A, Katoh R: Expression of thyroid transcription factor-1 in normal and neoplastic lung tissues. Modern Pathol 15:1058-1067. 2002.

*          村田晋一, 望月邦夫, 中沢匡男, 近藤哲夫, 中村暢樹, 加藤良平: Microscopic Fluorescence Resonance Energy Transfer測定法の原理と問題点. 山梨医科大学雑誌 16:93-103 2002.

[2001]

*          Murata S, Herman P, Lakowicz J: Texture analysis of fluorescence lifetime images of at- and gc-rich regions in nuclei. J Histochem Cytochem 49:1443-1452. 2001.

*          Murata S, Herman P, Lakowicz J: Texture Analysis of Fluorescence Lifetime Images of Nuclear DNA with Effect of Fluorescence Resonance Energy Transfer. Cytometry (Part A) 43:94-100 2001.

[2000]

*          Murata S, Herman P, Lin H-J, Lakowicz J: Fluorescence Lifetime Imaging of Nuclear DNA; Effect of Fluorescence Resonance Energy Transfer. Cytometry (Part A) 41:178-185 2000.

*          Murata S, Kusba J, Piszczek G, Gryczynski I, Lakowicz J: Donor Fluorescence Decay Analysis for Energy Transfer in Double-Helical DNA with Various Acceptor Concentration. Biopolymers 57:306-315 2000.

*          柳田正志, 内藤和世, 閑啓太郎, 天池寿, 落合登志哉, 大森吉弘, 土橋康成, 村田晋一: 混合型胃小細胞癌の1例. 消化器外科 23:109-112 2000.

[1987-1999]

*          平田正純, 楠崎克之, 平澤泰介, 松村隆文, 村田晋一, 土橋康成: 橈骨に発生した充実性動脈瘤様骨嚢腫の1例. 整形外科 50:618-620 1999.

*          小西英一, 土橋康成, 村田晋一, 武真, 剛山, 益沢尚子, 村田博昭, 楠崎克之, 平澤泰介: 骨内分化型骨肉腫の３例. . 日本整形外科学会雑誌 72:963 1998.

*          村田晋一, 浦田洋二, 山野剛, 平井栄美, 古谷昌則, 芦原司: イメージサイトメトリーを応用した甲状腺乳頭癌細胞の核形態解析. 内分泌外科　甲状腺病理カラーアトラス 15:1-5 1998.

*          田部志郎, 小西英一, 井村健一郎, 大坂芳夫, 土屋邦之, 迫裕孝, 井岡二朗, 中根佳宏, 村田晋一: 非浸潤性アポクリン乳管癌の1例. 京都府立医科大学雑誌 107:1125-1129 1998.

*          土橋康成, 真嵜武, 村田晋一, 小西英一, 志村和穂, 赤松尚明, 伊藤剛, 沼田智, 園山輝久, 山岸久一: 成人の肝硬変を背景として発生した肝腫瘍の一手術例. 病院病理 15:84 1998.

*          土橋康成, 泰之榎, 武真, 村田晋一: 剖検により明らかとなった門脈血栓症の１例. 病理と臨床 16:418-419 1998.

*          土橋康成, 武真, 村田晋一, 泰之榎, 永田昭博, 司 芦, 内藤和世, 赤坂裕三: 京都府における地域医療支援テレパソロジーのコスト・ベネフィットの検討. 第二回遠隔医療研究会論文集 69-72 1998.

*          鈴木貴之, 後藤武近, 中村泰三, 竹上徹, 小野眞, 戸田省吾, 益澤尚子, 村田晋一, 土橋康成: 部分型縦隔内甲状腺腫(濾胞癌)の1例. 京都医学会雑誌 45:41-44 1998.

*          真崎武, 村田晋一, 土橋康成, 他: 被包された境界明瞭な巨大悪性肺腫瘍の1例. 病院病理 15:28 1997.

*          芦原司, 小西英一, 村田晋一, 山野剛, 平井栄美, 楠崎克之, 浦田洋二: 細胞測光から画像解析へ: 組織細胞化学１９９６. 東京, 学際企画, p 31-40, 1996.

*          Itoi H, Yamagishi M, Nakata M, Ueda Y, Sonoyama T, Murata S, Urata Y, Ashihara T, T. O: The quantitative analysis of gastric cancer cell using a cytofluorometry and an image cytometry. International gastric cancer congress 1:849-853 1995.

*          芦原司, 村田晋一, 小西英一, 楠崎克之, 浦田洋二: Morphometry: 組織細胞化学１９９５. 東京, 学際企画, p 34-41, 1995.

*          浦田洋二, 小西英一, 村田晋一, 芦原司: 染色法　蛍光抗体法: 臨床検査. 35-38, 1995.

*          浦田洋二, 村田晋一, 小西英一, 芦原司: 蛍光標識免疫組織化学: 組織細胞化学１９９５. 東京, 学際企画, p 92-97, 1995.

*          菅邦彦, 安河内秀之, 林英夫, 中川潤, 木谷輝夫, 矢田泰弘, 多田寛, 勝目紘, 中尾誠, 谷脇雅史, 岸本光夫, 村田晋一, 山下詠子: 腹水を主訴とし急性呼吸不全で死亡した症例. 京都医学会雑誌 42:1-22 1995.

*          村田晋一, 寺内邦彦, 浦田洋二, 芦原司: 特殊技術・応用　共焦点顕微鏡: 臨床検査. 79-83, 1995.

*          久保速三, 村田晋一, 浦田洋二, 糸井啓純, 岡隆宏, 芦原司: イメージサイトメトリーを応用した大腸腫瘍細胞の核形態解析. 癌と化学療法 20:748-751 1993.

*          村田晋一, 久保速三, 糸井啓純, 小西英一, 浦田洋二, 芦原司: 定量的組織細胞化学のための画像解析の基本的技術: 組織細胞化学１９９３. 東京, 学際企画, p 126-139, 1993.

*          芦原司, 村田晋一, 浦田洋二, 小西英一, 糸井啓純: Image Cytometry の進歩画像解析装置最近の進歩とイメージサイトメトリー研究の動向. 日本臨床 50:2497-2504 1992.

*          芦原司, 村田晋一, 糸井啓純, 小西英一, 浦田洋二: 癌の顕微鏡形態診断の客観化と自動化. 日本医学会総会会誌 23:114-115 1992.

*          安住有史, 久保速三, 糸井啓純, 山岸久一, 岡隆宏, 小西英一, 村田晋一, 芦原司: 核DNA量分析に必要な基礎知識と膵への応用. 胆と膵 13:239-246 1992.

*          Y. U, H. I, S. M, E. K, K. U, Y. A, Ashihara T: From cytofluorometry to fluorescence image analysis. Acta Histochem. Cytochem. 24:367-374 1991.

*          芦原司, 小西英一, 村田晋一, 浦田洋二, 藤本高久, 香川恵造, 楠崎克之, 蒲池正浩, 土橋康成: 老化とは−老化時計と病気. 健やかな長寿 1-51 1991.

*          芦原司, 村田晋一, 葛原啓, 小西英一, 竹下秀之, 式田年晴, 楠崎克之, 岸本光夫, 浦田洋二, 蒲池正浩: 核DNA量からみた癌の生物学的特性と予後 総論基礎の立場から. KARKINOS 4:773-781 1991.

*          芦原司, 楠崎克之, 小西英一, 安住有史, 村田晋一, 岸本光夫, 上田和茂, 浦田洋二: 癌の生物学的悪性度 癌細胞核DNA 核内DNA量とploidy 解析顕微測光法による研究. 肝・胆・膵 23:557-564 1991.

*          芦原司, 楠崎克之, 小西英一, 香川恵造, 村田晋一, 岸本光夫, 浦田洋二, 土橋康成: 骨細胞のライフサイクルと加齢変化−全身主要臓器の細胞核DNA定量の観点から. 咬合の生涯維持 11-21 1991.

*          村田晋一: 甲状腺の腺腫様過形成と腫瘍の細胞学的特性 DNA顕微蛍光測光法とイメージサイトメトリーを用いて. 京都府立医科大学雑誌 100:311-331 1991.

*          芦原司, 香川敬造, 楠崎克之, 糸井啓純, 村田晋一, 小西英一, 浦田洋二, 上田和茂, 細川洋平, 土橋康成: 顕微蛍光測光法による生態試料分析の動向. 光技術コンタクト 28:627-637 1990.

*          芦原司, 細川洋平, 小西英一, 村田晋一, 浦田洋二, 土橋康成: 顕微蛍光測光法のための標本作製法と蛍光染色法. レーザ顕微鏡研究会誌 1990.

*          芦原司, 村田晋一: 「病理データベース」利用の促進に関して. 日本病理学会会誌 79:97-99 1990.

*          芦原司, 村田晋一: 日本病理データベースの利用について. 日病会誌 79:97-99 1990.

*          浦田洋二, 村田晋一, 糸井啓純, 小西英一, 芦原司: 定量的組織細胞化学に基づく蛍光画像解析. 細胞 22:271-274 1990.

*          糸井啓純, 浦田洋二, 竹下秀之, 村田晋一, 小西英一, 安住有史, 中田雅支, 山岸久一, 岡隆宏, 芦原司: 蛍光画像解析法を結合した顕微蛍光測光法による多核細胞の核DNA定量への応用−イメージサイトメトリの試み−. 病理と臨床 8:1443-1447 1990.

*          村田晋一, 糸井啓純, 浦田洋二, 土橋康成, 松塚文夫, 司芦: 甲状腺の濾胞性腫瘤の細胞増殖動態と核形態の定量的解析 画像解析装置結合型顕微蛍光測光装置を用いて. 日本臨床細胞学会雑誌 29:819-828 1990.

*          芦原司, 香川敬造, 藤本高久, 浦田洋二, 小西英一, 村田晋一, 上田和茂, 金井塚敏広, 蒲池正浩, 細川洋平, 土橋康成: 消化器疾患の加齢変化−細胞核DNAでみる病理形態像. Mebio 6:33-38 1989.

*          芦原司, 糸井啓純, 村田晋一, 浦田洋二, 小西英一, 上田和茂, 金井塚敏弘, 細川洋平, 土橋康成: 組織細胞化学のディジタル・イメージング: 組織細胞化学１９８９.学際企画, p 127-137 1989.

*          村田晋一, 浦田洋二, 蒲池正浩, 諸富直文, 土橋康成, 松塚文夫, 寛二 隈, 司芦: DNA顕微蛍光測光法による甲状腺腫瘍の細胞増殖解析 組織型および分化度との比較検討. 病理と臨床 7:1009-1016 1989.

*         芦原司, 糸井啓純, 浦田洋二, 小西英一, 香川恵造, 諸富直文, 上田和茂, 村田晋一, 竹下秀之, 葛原啓, 蒲池正浩, 土橋康成: 顕微蛍光測光法によるがん細胞解析. フローサイトメトリー研究会抜刷 6-18 1988.

*          村田晋一, 浦田洋二, 正巳 島, 小関忠尚, 松井道宣, 一徳, 司芦: Malignant insulinomaの1 例免疫組織化学および顕微蛍光測光法による検索. 病理と臨床 6:1095-1100 1988.

*         細川洋平, 上田和茂, 西真弓, 辻吉朗, 村田晋一, 小西英一, 金井塚敏弘, 葛原啓, 竹下秀之, 浦田洋二, 土橋康成, 平林加寿子, 矢野純一, 芦原司: in situ hybridizationによるHL-60細胞およびヒト癌におけるc-myc mRNAの検出. Oncologia 20:101-103 1987.